Available Benchling APIs

AA sequences

List AA sequences

X

Create an AA sequence

X

Get an AA sequence

X

Update an AA sequence

X

Archive AA sequences

X

Auto-annotate AA sequences with matching features from specified feature libraries

X

Bulk create AA sequences

X

Bulk get AA sequences by ID

X

Bulk update AA sequences

X

Unarchive AA sequences

X

Apps

Create an app canvas

X

Get app canvas

X

Update app canvas

X

Archive app canvases

X

Unarchive app canvases

X

Get app configuration items

X

Create app configuration item

X

Get app configuration item

X

Update app configuration item

X

Bulk create app configuration items limit of 1000 app config items per request

X

Bulk update app configuration items limit of 1000 app config items per request

X

Create a new app session

X

Get an app session

X

Update app session

X

List apps

X

Create an app

X

Get an app by ID

X

Update an app

X

Archive apps

X

Unarchive apps

X

Schemas

List assay result schemas

X

Get a result schema by ID

X

List assay run schemas

X

Get a run schema by ID

X

List batch schemas

X

Get a batch schema by ID

X

List box schemas

X

Get a box schema by ID

X

List container schemas

X

Get a container schema by ID

X

List entity schemas

X

Get an entity schema by ID

X

List entry schemas

X

Get an entry schema by ID

X

List location schemas

X

Get a location schema by ID

X

List plate schemas

X

Get a plate schema by ID

X

List request schemas

X

Get a request schema by ID

X

List request task schemas

X

Get a request task schema by ID

X

List workflow task schemas

X

Get a workflow task schema

X

Assay results

List results

X

Create 1 or more results

X

Get a result

X

Archive 1 or more results

X

Bulk create results

X

Gets multiple results specified by a list of IDs

X

Unarchive 1 or more results

X

Create a transaction

X

Create results in a transaction

X

Abort a transaction

X

Commit a transaction

X

Assay runs

List runs

X

Create 1 or more runs

X

Get a run

X

Update a run

X

List automation input generators by run

X

List automation output processors by run

X

Archive assay runs

X

Bulk get runs by ID

X

Unarchive assay runs

X

Lab automation

Get a lab automation transform step

X

Update a lab automation transform step

X

Get an automation input generator

X

Update an automation input generator

X

Generate input with an automation input generator

X

List non-empty automation output processors

X

Create automation output processor

X

Get an automation output processor

X

Update an automation output processor

X

Process output with an automation output processor

X

Archive automation output processors and linked results

X

Unarchive automation output processors and linked results

X

Batches

List batches

X

Create a batch

X

Get a batch

X

Update a batch

X

Archive batches

X

Bulk get batches

X

Unarchive batches

X

Get an entity's batches

X

Blobs

Upload single-part blob

X

Get a blob

X

Download a blob

X

Get a blob's download URL

X

Upload a part of a multi-part blob

X

Abort multi-part blob upload

X

Complete multi-part blob upload

X

Bulk get blobs by UUID

X

Initiate multi-part blob upload

X

Boxes

List boxes

X

Create a box

X

Get a box

X

Update a box

X

List a box's contents

X

Archive boxes

X

Bulkget boxes

X

Unarchive boxes

X

Containers

List containers

X

Create a new container

X

Get a container by ID

X

Update a container

X

List a container's contents

X

Delete a container content

X

Get a container content

X

Update a container content

X

Transfer into container

X

Archive containers

X

Bulk create containers limit of 1000 containers per request

X

Bulk get a set of containers

X

Bulk update containers

X

Check in containers

X

Check out containers

X

Print labels

X

Reserve containers

X

Unarchive containers

X

Transfers into containers

X

Custom entities

List custom entities

X

Create a custom entity

X

Get a custom entity

X

Update a custom entity

X

Archive custom entities

X

Bulk create custom entities

X

Bulk get custom entities by ID

X

Bulk update custom entities

X

Unarchive custom entities

X

DNA oligos

List DNA oligos

X

Create a DNA oligo

X

Get a DNA oligo

X

Update a DNA oligo

X

Archive DNA oligos

X

Bulk create DNA oligos

X

Bulk update DNA oligos

X

Unarchive DNA oligos

X

RNA oligos                

List custom notations

X

List RNA oligos

X

Create an RNA oligo

X

Get an RNA oligo

X

Update an RNA oligo

X

Archive RNA oligos

X

Bulk create RNA oligos

X

Bulk update RNA oligos

X

Unarchive RNA oligos

X

DNA alignments

List DNA alignments

X

Delete a DNA alignment

X

Get a DNA alignment

X

Create a consensus DNA alignment

X

Create a template DNA alignment

X

DNA sequences

List DNA sequences

X

Create a DNA sequence

X

Get a DNA sequence

X

Update a DNA sequence

X

Archive DNA sequences

X

Auto-annotate DNA sequences with matching features from specified feature libraries

X

Autofill DNA sequence parts

X

Autofill DNA sequence translations

X

Bulk create DNA sequences

X

Bulk get DNA sequences by ID

X

Bulk update DNA sequences

X

Unarchive DNA sequences

X

Dropdowns

List dropdowns

X

Create a dropdown

X

Get a dropdown

X

Update a dropdown

X

Archive dropdown options

X

Unarchive dropdown options

X

Entries

List entries

X

Create a notebook entry

X

Get a notebook entry by ID

X

Update a notebook entry's metadata

X

Retrieves the metadata for an external file use the 'download URL' to download the actual file

X

Archive notebook entries

X

Get notebook entries using entry IDs or display IDs

X

Unarchive notebook entries

X

List entry templates

X

Get a notebook template entry by ID

X

Events

List events

X

Exports

Export item

X

Feature libraries

List feature libraries

X

Create a feature library

X

Get a feature library by ID

X

Update a feature library

X

List features

X

Create a feature

X

Get a feature by ID

X

Update a feature

X

Bulk create features

X

Folders

List folders

X

Create folder

X

Get a folder by ID

X

Archive folders

X

Unarchive folders

X

Legacy workflows

List legacy workflow stage run input samples

X

List legacy workflow stage run output samples

X

List legacy workflow stage run registered samples

X

List legacy workflow stage runs

X

List legacy workflows

X

Update legacy workflow

X

List legacy workflow stages

X

Locations

List locations

X

Create a location

X

Get a location by ID

X

Update a location

X

Archive locations

X

Bulkget locations

X

Unarchive locations

X

Mixtures

List mixtures

X

Create a mixture

X

Get a mixture

X

Update a mixture

X

Archive mixtures

X

Bulk create mixtures

X

Bulk update mixtures

X

Unarchive mixtures

X

Molecules

List molecules

X

Create a molecule

X

Get a molecule

X

Update a molecule

X

Archive molecules

X

Bulk create molecules

X

Bulk update molecules

X

Unarchive molecules

X

Monomers

List monomers

X

Create a monomer

X

Update a monomer

X

Archive monomers

X

Unarchive monomers

X

Nucleotide alignments

List nucleotide alignments

X

Delete a nucleotide alignment

X

Get a nucleotide alignment

X

Create a consensus nucleotide alignment

X

Create a template nucleotide alignment

X

Oligos

List oligos

X

Create an oligo

X

Get an oligo

X

Update an oligo

X

Archive oligos

X

Bulk create DNA oligos

X

Bulk get oligos by ID

X

Unarchive oligos

X

Organizations

List organizations

X

Get an organization by ID

X

Plates

List plates

X

Create a plate

X

Get a plate

X

Update a plate

X

Archive plates

X

Bulkget plates

X

Unarchive plates

X

Projects

List projects

X

Get a project by ID

X

Archive projects

X

Unarchive projects

X

Registry

List registries

X

Get registry

X

List batch schemas by registry

X

List box schemas by registry

X

List container schemas by registry

X

List dropdowns for a given registry

X

List entity schemas by registry

X

List location schemas by registry

X

List plate schemas by registry

X

Bulk get registered entities

X

Register entities

X

Unregister entities

X

Printers

List printers

X

Label templates

List label templates

X

Inventory

Validate barcodes

X

Requests

List request fulfillments

X

Get a request's fulfillment

X

List requests

X

Create a request

X

Get a request by ID

X

Update a request

X

Get a request's response

X

Create tasks for a request

X

Bulk update tasks for a request

X

Update the status of sample groups in a request

X

Bulk get requests

X

RNA sequences

List RNA sequences

X

Create an RNA sequence

X

Get an RNA sequence

X

Update an RNA sequence

X

Archive RNA sequences

X

Auto-annotate RNA sequences with matching features from specified feature libraries

X

Autofill RNA sequence parts

X

Autofill RNA sequence translations from amino acid sequences with matching schemas

X

Bulk create RNA sequences

X

Bulk get RNA sequences by ID

X

Bulk update RNA sequences

X

Unarchive RNA sequences

X

Tasks

Get a task by ID

X

Teams

List teams

X

Get a team by ID

X

Authentication

Generate a token for usage with authenticating via OAuth2 in subsequent API calls

X

Users

List users

X

Create a user

X

Get a user by ID

X

Update a user by ID

X

Last user activity

X

Bulk create users

X

Bulk update users

X

Warehouse

Create Benchling warehouse credentials

X

Workflow outputs

List workflow outputs

X

Create a new workflow output

X

Get a workflow output

X

Update a workflow output

X

Archive one or more workflow outputs

X

Bulk create new workflow outputs

X

Bulk update workflow outputs

X

Unarchive one or more workflow outputs

X

Legacy workflows (deprecated)

List stage run input samples

X

List stage run output samples

X

List stage run registered samples

X

List workflow stage runs

X

List workflows

X

Update workflow

X

List workflow stages

X

Workflow task groups

List workflow task groups

X

Create a new workflow task group

X

Get a workflow task group

X

Update a workflow task group

X

Archive one or more workflows

X

Unarchive one or more workflows

X

Workflow tasks

List workflow tasks

X

Create a new workflow task

X

Get a workflow task

X

Update a workflow task

X

Creates a new workflow task with the same fields and assignee as the provided task and creates a relationship between the two tasks

X

Archive one or more workflow tasks

X

Bulk creates new workflow tasks where each new task has the same fields and assignee as one of the provided tasks and creates a relationship between the provided task and its copy

X

Create one or more workflow tasks

X

Update one or more workflow task

X

Unarchive one or more workflow tasks

X